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Bug#641581: marked as done (ITP: libzerg -- C library for parsing the output of NCBI BLAST programs)



Your message dated Fri, 16 Sep 2011 19:47:26 +0000
with message-id <E1R4eNi-00011M-Qy@franck.debian.org>
and subject line Bug#641581: fixed in libzerg 1.0.7-1
has caused the Debian Bug report #641581,
regarding ITP: libzerg -- C library for parsing the output of NCBI BLAST programs
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
641581: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=641581
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Laszlo Kajan <lkajan@rostlab.org>


* Package name    : libzerg
  Version         : 1.0.7
  Upstream Author : Apua C.M. Paquola <apuapaquola@gmail.com>
* URL             : http://code.google.com/p/libzerg/
* License         : GNU GPL v2
  Programming Lang: C
  Description     : C library for parsing the output of NCBI BLAST programs
  Reference       : Paquola, Apuã C M, Machado, Abimael A, Reis, Eduardo M, Da Silva, Aline M, and Verjovski-Almeida, Sergio: Zerg: a very fast BLAST parser library., Bioinformatics 19(8), volume 19, 1035–6, May 2003

Zerg is a C library for parsing the output of NCBI BLAST programs. Based on a GNU Flex-generated lexical scanner, it runs extremely fast, being especially useful for processing large volumes of data. Benchmark tests show that Zerg is over two orders of magnitude faster than some widely used BLAST parsers.



--- End Message ---
--- Begin Message ---
Source: libzerg
Source-Version: 1.0.7-1

We believe that the bug you reported is fixed in the latest version of
libzerg, which is due to be installed in the Debian FTP archive:

libzerg-dbg_1.0.7-1_amd64.deb
  to main/libz/libzerg/libzerg-dbg_1.0.7-1_amd64.deb
libzerg-dev_1.0.7-1_amd64.deb
  to main/libz/libzerg/libzerg-dev_1.0.7-1_amd64.deb
libzerg0_1.0.7-1_amd64.deb
  to main/libz/libzerg/libzerg0_1.0.7-1_amd64.deb
libzerg_1.0.7-1.debian.tar.gz
  to main/libz/libzerg/libzerg_1.0.7-1.debian.tar.gz
libzerg_1.0.7-1.dsc
  to main/libz/libzerg/libzerg_1.0.7-1.dsc
libzerg_1.0.7.orig.tar.gz
  to main/libz/libzerg/libzerg_1.0.7.orig.tar.gz



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 641581@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Laszlo Kajan <lkajan@rostlab.org> (supplier of updated libzerg package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Wed, 14 Sep 2011 15:29:37 +0200
Source: libzerg
Binary: libzerg0 libzerg-dev libzerg-dbg
Architecture: source amd64
Version: 1.0.7-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Laszlo Kajan <lkajan@rostlab.org>
Description: 
 libzerg-dbg - debugging symbols for libzerg
 libzerg-dev - C library for parsing the output of NCBI BLAST programs
 libzerg0   - C library for parsing the output of NCBI BLAST programs
Closes: 641581
Changes: 
 libzerg (1.0.7-1) unstable; urgency=low
 .
   * Initial release (Closes: #641581)
Checksums-Sha1: 
 267e77324434d6a5e95ea31b2a2364ae707152d9 1341 libzerg_1.0.7-1.dsc
 a190978a9f2cf827c2516e70db8606e0684b96c9 11906 libzerg_1.0.7.orig.tar.gz
 ef1614c35f8bdc553529a998ba13d936d6a85bb3 280210 libzerg_1.0.7-1.debian.tar.gz
 4587318674fbe43424edd0b2a11a631e942712ad 22862 libzerg0_1.0.7-1_amd64.deb
 60f11de6218a4737ae43b2161a81ec1c12f15f24 23380 libzerg-dev_1.0.7-1_amd64.deb
 6d15a2434da759def3f7198874019bb2049aca50 16616 libzerg-dbg_1.0.7-1_amd64.deb
Checksums-Sha256: 
 ddeb5be88d56772473280abffd59d154befde30d9298410d1d093642d507adcf 1341 libzerg_1.0.7-1.dsc
 046339f6ce8495ecb5d3746ed276375c4a5a3a5568d16331944aa4301cc9ea87 11906 libzerg_1.0.7.orig.tar.gz
 4c72f415f7322b11f04bebd833986664eb5f0000a166983040998054eda05df4 280210 libzerg_1.0.7-1.debian.tar.gz
 38e68ac5a3850bb989667980c91dc6e499ba5ba83ac736037a57279f8f65370a 22862 libzerg0_1.0.7-1_amd64.deb
 b33a567c0e5d6ffc6866f968b613b81a8f6292c450fc84cabda7a989ab38d0ac 23380 libzerg-dev_1.0.7-1_amd64.deb
 4454832093594025853a0b3254ebf2b967c8513285241c8a2e5444cc04abf0c0 16616 libzerg-dbg_1.0.7-1_amd64.deb
Files: 
 b16205244ad4778a48236f32b2d56d15 1341 science extra libzerg_1.0.7-1.dsc
 01b942a18e8a1b40cc1f2b971d075e7f 11906 science extra libzerg_1.0.7.orig.tar.gz
 f71ead1c77877830e264e6e284357682 280210 science extra libzerg_1.0.7-1.debian.tar.gz
 67893ccd9055ae005688be171dd72528 22862 libs extra libzerg0_1.0.7-1_amd64.deb
 7cd72967836ee3101673a1e0dc3b1bc3 23380 libdevel extra libzerg-dev_1.0.7-1_amd64.deb
 8094781c29e508ef6dedd91b7111b5cd 16616 debug extra libzerg-dbg_1.0.7-1_amd64.deb

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