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Bug#628548: marked as done (ITP: r-bioc-limma -- linear models for microarray data)

Your message dated Thu, 02 Jun 2011 13:17:45 +0000
with message-id <E1QS7mT-0001Ak-Kc@franck.debian.org>
and subject line Bug#628548: fixed in r-bioc-limma 3.8.2-1
has caused the Debian Bug report #628548,
regarding ITP: r-bioc-limma -- linear models for microarray data
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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-- 
628548: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=628548
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Charles Plessy <plessy@debian.org>

  Package name    : r-bioc-limma
  Version         : 3.8.2
  Upstream Author : Gordon Smyth <smyth@wehi.edu.au>
  URL             : http://bioinf.wehi.edu.au/limma/
  License         : GPL, LGPL
  Programming Lang: R, C
  Description     : linear models for microarray data

 A Bioconductor package for the analysis of gene expression microarray data,
 especially the use of linear models for analysing designed experiments and the
 assessment of differential expression. The package includes pre-processing
 capabilities for two-colour spotted arrays. The differential expression methods
 apply to all array platforms and treat Affymetrix, single channel and two
 channel experiments in a unified way.

r-bioc-limma is needed to package edgeR (r-bioc-edger), which is quite popular
for the analysis of high-throughput transcriptome sequencing experiments.

--- End Message ---
--- Begin Message --- 
Source: r-bioc-limma
Source-Version: 3.8.2-1

We believe that the bug you reported is fixed in the latest version of
r-bioc-limma, which is due to be installed in the Debian FTP archive:

r-bioc-limma_3.8.2-1.diff.gz
  to main/r/r-bioc-limma/r-bioc-limma_3.8.2-1.diff.gz
r-bioc-limma_3.8.2-1.dsc
  to main/r/r-bioc-limma/r-bioc-limma_3.8.2-1.dsc
r-bioc-limma_3.8.2-1_amd64.deb
  to main/r/r-bioc-limma/r-bioc-limma_3.8.2-1_amd64.deb
r-bioc-limma_3.8.2.orig.tar.gz
  to main/r/r-bioc-limma/r-bioc-limma_3.8.2.orig.tar.gz



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 628548@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Charles Plessy <plessy@debian.org> (supplier of updated r-bioc-limma package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Thu, 02 Jun 2011 13:07:58 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: source amd64
Version: 3.8.2-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Charles Plessy <plessy@debian.org>
Description: 
 r-bioc-limma - linear models for microarray data
Closes: 628548
Changes: 
 r-bioc-limma (3.8.2-1) unstable; urgency=low
 .
   * Initial release (closes: #628548).
Checksums-Sha1: 
 1c36f60237b39f9e493282344bb600106c8ce4aa 1931 r-bioc-limma_3.8.2-1.dsc
 8424f7ce6d39355f2b410db4fc11c7ba67d65bed 916654 r-bioc-limma_3.8.2.orig.tar.gz
 1aee4cf6f887e704f27946fce20a345103899e07 2158 r-bioc-limma_3.8.2-1.diff.gz
 7a9021d1a25139cd267b1cbe65c70f00f65f33f6 1395084 r-bioc-limma_3.8.2-1_amd64.deb
Checksums-Sha256: 
 e0660ec191a2223ff29e489646a7681ed58c03c709ff7def4c5eee25a44f1886 1931 r-bioc-limma_3.8.2-1.dsc
 9a824792349de351a6623102feb5c2f4bc3642215496eb3422a78938422c970f 916654 r-bioc-limma_3.8.2.orig.tar.gz
 6f5a543511b1b3d29d68e2dbf4aa48c1371fa0af2b9f9d40272132f629f6b94f 2158 r-bioc-limma_3.8.2-1.diff.gz
 e00c45565d2296ad3c74e6364d350f488e2bf5d49845694739db00cdcab61a02 1395084 r-bioc-limma_3.8.2-1_amd64.deb
Files: 
 6bc37ee8f8768fa5caff6f025503f462 1931 gnu-r optional r-bioc-limma_3.8.2-1.dsc
 3ee3f6366c152f599dbd8bedefded85b 916654 gnu-r optional r-bioc-limma_3.8.2.orig.tar.gz
 63cf5d468f9d7468cf41bb22c4554915 2158 gnu-r optional r-bioc-limma_3.8.2-1.diff.gz
 b5de0e25504dcc8ed7abb73be130c3d8 1395084 gnu-r optional r-bioc-limma_3.8.2-1_amd64.deb

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