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Bug#587274: marked as done (RFP: denoiser -- Rapid denoising of pyrosequencing amplicon data)

Your message dated Wed, 04 May 2011 22:33:17 +0000
with message-id <E1QHkdB-0001om-Pn@franck.debian.org>
and subject line Bug#587274: fixed in denoiser 0.9.1-1
has caused the Debian Bug report #587274,
regarding RFP: denoiser -- Rapid denoising of pyrosequencing amplicon data
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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immediately.)


-- 
587274: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=587274
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller <steffen_moeller@gmx.de>

* Package name    : denoiser
  Version         : 0.8.5
* URL             : http://www.microbio.me/denoiser/
* License         : GPL
  Programming Lang: Haskell
  Description     : Rapid denoising of pyrosequencing amplicon data

 To denoise pyrosequencing amplicon data, the package exploits the
 rank-abundance distribution.  PyroNoise uses an expectation maximization
 (EM) algorithm to figure out the most likely sequence for every read. We,
 instead, use a greedy scheme that can be seen as an approximation to
 PyroNoise. According to several test data sets, the approximation gives
 very similar results in a fraction of the time.

--- End Message ---
--- Begin Message --- 
Source: denoiser
Source-Version: 0.9.1-1

We believe that the bug you reported is fixed in the latest version of
denoiser, which is due to be installed in the Debian FTP archive:

denoiser_0.9.1-1.debian.tar.gz
  to main/d/denoiser/denoiser_0.9.1-1.debian.tar.gz
denoiser_0.9.1-1.dsc
  to main/d/denoiser/denoiser_0.9.1-1.dsc
denoiser_0.9.1-1_amd64.deb
  to main/d/denoiser/denoiser_0.9.1-1_amd64.deb
denoiser_0.9.1.orig.tar.gz
  to main/d/denoiser/denoiser_0.9.1.orig.tar.gz



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 587274@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated denoiser package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Wed, 04 May 2011 15:40:16 +0200
Source: denoiser
Binary: denoiser
Architecture: source amd64
Version: 0.9.1-1
Distribution: experimental
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description: 
 denoiser   - Rapid denoising of pyrosequencing amplicon data
Closes: 587274
Changes: 
 denoiser (0.9.1-1) experimental; urgency=low
 .
   [ Steffen Moeller ]
   * New upstream release (Closes: #587274).
 .
   [ Andreas Tille ]
   * Upload to main
   * Use dh_python2
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 fa715812460ca54e29e85b6aaf1dbbe269ccbe6b 355642 denoiser_0.9.1.orig.tar.gz
 21aa1b90553d60ad2aea799696bd7b11d3bcc79c 3748 denoiser_0.9.1-1.debian.tar.gz
 8566882b3a1a3dbca629d8986e6aaf11199ceb81 422466 denoiser_0.9.1-1_amd64.deb
Checksums-Sha256: 
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 9c7dfc2ecad381923e747d07a4b5c2e59607f8f6cd9df537f5e651eeeb72f997 422466 denoiser_0.9.1-1_amd64.deb
Files: 
 2ce1d1c8e38332a23ce09143d310cda3 1351 science extra denoiser_0.9.1-1.dsc
 ad967f6055c762b1cef9501a045e7d9c 355642 science extra denoiser_0.9.1.orig.tar.gz
 8a3b32978d526b7e4e608c86559a8e68 3748 science extra denoiser_0.9.1-1.debian.tar.gz
 e8088d34c4535554921199c4da0b7d4d 422466 science extra denoiser_0.9.1-1_amd64.deb

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--- End Message ---
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