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Bug#614657: marked as done (ITP: clonalframe -- inference of bacterial microevolution using multilocus sequence data)

Your message dated Sat, 09 Apr 2011 22:32:06 +0000
with message-id <E1Q8ghK-0003aH-Rh@franck.debian.org>
and subject line Bug#614657: fixed in clonalframe 1.2-1
has caused the Debian Bug report #614657,
regarding ITP: clonalframe -- inference of bacterial microevolution using multilocus sequence data
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
614657: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=614657
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: andreas@an3as.eu

* Package name    : clonalframe
  Version         : 1.2
  Upstream Author : Xavier Didelot <xavier.didelot@gmail.com>
* URL             : http://www.xavierdidelot.xtreemhost.com/clonalframe.htm
* License         : GPL
  Programming Lang: C++
  Description     : inference of bacterial microevolution using multilocus sequence data
 ClonalFrame identifies the clonal relationships between the members of
 a sample, while also estimating the chromosomal position of homologous
 recombination events that have disrupted the clonal inheritance.
 .
 ClonalFrame can be applied to any kind of sequence data, from a single
 fragment of DNA to whole genomes. It is well suited for the analysis of
 MLST data, where 7 gene fragments have been sequenced, but becomes
 progressively more powerful as the sequenced regions increase in length
 and number up to whole genomes. However, it requires the sequences to be
 aligned. If you have genomic data that is not aligned, we recommend
 using Mauve which produces alignment of whole bacterial genomes in
 exactly the format required for analysis with ClonalFrame.

The package will be maintained in Debian Med team and is available at
Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/clonalframe/trunk


-- System Information:
Debian Release: squeeze/sid
  APT prefers oldstable
  APT policy: (500, 'oldstable'), (50, 'unstable')
Architecture: i386 (i686)

--- End Message ---
--- Begin Message --- 
Source: clonalframe
Source-Version: 1.2-1

We believe that the bug you reported is fixed in the latest version of
clonalframe, which is due to be installed in the Debian FTP archive:

clonalframe_1.2-1.debian.tar.gz
  to main/c/clonalframe/clonalframe_1.2-1.debian.tar.gz
clonalframe_1.2-1.dsc
  to main/c/clonalframe/clonalframe_1.2-1.dsc
clonalframe_1.2-1_amd64.deb
  to main/c/clonalframe/clonalframe_1.2-1_amd64.deb
clonalframe_1.2.orig.tar.gz
  to main/c/clonalframe/clonalframe_1.2.orig.tar.gz



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 614657@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated clonalframe package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Fri, 11 Feb 2011 22:52:24 +0100
Source: clonalframe
Binary: clonalframe
Architecture: source amd64
Version: 1.2-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description: 
 clonalframe - inference of bacterial microevolution using multilocus sequence d
Closes: 614657
Changes: 
 clonalframe (1.2-1) unstable; urgency=low
 .
   * Initial release (Closes: #614657)
Checksums-Sha1: 
 2e4f920c5953e7b903939f5e127aef1a40f81d53 1367 clonalframe_1.2-1.dsc
 3e107ba13c13cc6bce1531b66a4e337dc4e30675 45475 clonalframe_1.2.orig.tar.gz
 eec3cd6c76b84a76a12c0c1ed20e1f421f392182 3737 clonalframe_1.2-1.debian.tar.gz
 bd4de97db768c3dece029b07a5035533752c8416 58186 clonalframe_1.2-1_amd64.deb
Checksums-Sha256: 
 791abf43b48d5dc4d0e95e536f9504344a0a782e25ddc4126a653c95eed458e6 1367 clonalframe_1.2-1.dsc
 eded106eb6193acd47eef20ae43d6cdcf64ca26aee89f7d81f49d894847f1b67 45475 clonalframe_1.2.orig.tar.gz
 fdd9765a4c35e93e9596c4acf5bc556cb43771081f2906578b7749337c13e6ed 3737 clonalframe_1.2-1.debian.tar.gz
 88dce63386ad451924d110b4771b8b933bcfb44f4236028e4fdfd185aed4881b 58186 clonalframe_1.2-1_amd64.deb
Files: 
 1a33f29c51fb48b445a8251c77be8557 1367 science optional clonalframe_1.2-1.dsc
 ee75640b1ea5dcf9aca0d732f55817c9 45475 science optional clonalframe_1.2.orig.tar.gz
 772ccfe77c0ae4290d5770055a633ccf 3737 science optional clonalframe_1.2-1.debian.tar.gz
 61d56925bb6e11d37097a41e1321d865 58186 science optional clonalframe_1.2-1_amd64.deb

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--- End Message ---
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