Bug#219453: marked as done (ITP: tigr-glimmer -- [Biology] gene detection in bacteria)
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and subject line Bug#219453: fixed in tigr-glimmer 2.12-1
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Date: Thu, 6 Nov 2003 18:04:52 +0100
From: Steffen Moeller <moeller@pzr.uni-rostock.de>
To: Debian Bug Tracking System <submit@bugs.debian.org>
Subject: ITP: tigr-glimmer -- [Biology] gene detection in bacteria
Message-ID: <20031106170452.GA17228@pzr.uni-rostock.de>
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Package: wnpp
Severity: wishlist
* Package name : tigr-glimmer
Version : 2.12
Upstream Author : Art Delcher <adelcher@tigr.org>, Steven Salzberg <salzberg@tigr.org>, Doug Harmon <dharmon@justice.loyola.edu>, Simon Kasif <kasif@bu.edu>, Owen White <owhite@tigr.org>
* URL : http://www.tigr.org/software/glimmer
* License : The Artistic License
Description : [Biology] gene detection in bacteria and archea
Developed by the TIGR institute this software detects coding sequences
in bacteria and archea.
Glimmer is a system for finding genes in microbial DNA, especially the
genomes of bacteria and archaea. Glimmer (Gene Locator and Interpolated
Markov Modeler) uses interpolated Markov models (IMMs) to identify the
coding regions and distinguish them from noncoding DNA.
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>From rdonald@auric.debian.org Fri Dec 26 22:19:52 2003
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From: Steffen Moeller <moeller@pzr.uni-rostock.de>
To: 219453-close@bugs.debian.org
X-Katie: lisa $Revision: 1.26 $
Subject: Bug#219453: fixed in tigr-glimmer 2.12-1
Message-Id: <E1Aa5Yt-0002dc-00@auric.debian.org>
Sender: Randall Donald <rdonald@auric.debian.org>
Date: Fri, 26 Dec 2003 22:56:23 -0500
Delivered-To: 219453-close@bugs.debian.org
Source: tigr-glimmer
Source-Version: 2.12-1
We believe that the bug you reported is fixed in the latest version of
tigr-glimmer, which is due to be installed in the Debian FTP archive:
tigr-glimmer_2.12-1.diff.gz
to pool/main/t/tigr-glimmer/tigr-glimmer_2.12-1.diff.gz
tigr-glimmer_2.12-1.dsc
to pool/main/t/tigr-glimmer/tigr-glimmer_2.12-1.dsc
tigr-glimmer_2.12-1_i386.deb
to pool/main/t/tigr-glimmer/tigr-glimmer_2.12-1_i386.deb
tigr-glimmer_2.12.orig.tar.gz
to pool/main/t/tigr-glimmer/tigr-glimmer_2.12.orig.tar.gz
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 219453@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Steffen Moeller <moeller@pzr.uni-rostock.de> (supplier of updated tigr-glimmer package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.7
Date: Thu, 16 Oct 2003 17:33:46 +0200
Source: tigr-glimmer
Binary: tigr-glimmer
Architecture: source i386
Version: 2.12-1
Distribution: unstable
Urgency: low
Maintainer: Steffen Moeller <moeller@pzr.uni-rostock.de>
Changed-By: Steffen Moeller <moeller@pzr.uni-rostock.de>
Description:
tigr-glimmer - [Biology] Gene detection in archea and bacteria
Closes: 219453
Changes:
tigr-glimmer (2.12-1) unstable; urgency=low
.
* Initial Release (Closes:#219453).
* Added man pages to upstream release
Files:
6adbecf0c6fc53045ba7ff9ccfb8a66c 617 science optional tigr-glimmer_2.12-1.dsc
075e9b61d72be44cc0026bf62d487107 79431 science optional tigr-glimmer_2.12.orig.tar.gz
b17f1083df950f326d8cde92126e3717 14926 science optional tigr-glimmer_2.12-1.diff.gz
15cf296452c2a1ea96e99c9fa66f2e19 114582 science optional tigr-glimmer_2.12-1_i386.deb
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