Bug#214601: marked as done (ITP: r-cran-qtl -- [Biology] GNU R package for genetic marker linkage analysis)
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and subject line Bug#214601: fixed in qtl 0.97.21-1
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>From moeller@pzr.uni-rostock.de Tue Oct 07 11:16:16 2003
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Date: Tue, 7 Oct 2003 18:16:14 +0200
From: Steffen Moeller <moeller@pzr.uni-rostock.de>
To: Debian Bug Tracking System <submit@bugs.debian.org>
Subject: ITP: r-cran-qtl -- [Biology] GNU R package for genetic marker linkage analysis
Message-ID: <[🔎] 20031007161614.GA19345@pzr.uni-rostock.de>
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Package: wnpp
Version: unavailable; reported 2003-10-07
Severity: wishlist
* Package name : r-cran-qtl
Version : 0.9.7-21
Upstream Author : Karl W. Broman <kbroman@jhsph.edu>, Hao Wu <haowu@jax.org>
* URL : http://www.biostat.jhsph.edu/~kbroman/qtl/index.html
* License : GPL
Description : [Biology] GNU R package for genetic marker linkage analysis
From the tutorial: R/qtl is an extensible, interactive environment for
mapping quantitative trait loci (QTLs) in experimental crosses. It is
implemented as an add-on-package for the freely available and widely used
statistical language/software R (see http://www.r-project.org). [...] The
user will benefit from the seamless integration of the QTL mapping
software into a general statistical analysis program. [...]
.
The current version of R/qtl includes facilities for estimating
genetic maps, identifying genotyping errors, and performing single-QTL
genome scans and two-QTL, two-dimensional genome scans, by interval
mapping (with EM algorithm), Haley-Knott regression, and multiple
imputation. All of this may be done in the presence of covariates
(such as sex, age or treatment). The fit of higher-order QTL models,
with sophisticated techniques for model comparisons and model search,
will be incorporated soon.
-- System Information:
Debian Release: testing/unstable
Architecture: i386
Kernel: Linux latitude 2.4.20 #11 Tue Jun 3 14:21:52 CEST 2003 i686
Locale: LANG=C, LC_CTYPE=C
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>From rdonald@auric.debian.org Sat Oct 18 02:24:22 2003
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From: Steffen Moeller <moeller@pzr.uni-rostock.de>
To: 214601-close@bugs.debian.org
X-Katie: lisa $Revision: 1.25 $
Subject: Bug#214601: fixed in qtl 0.97.21-1
Message-Id: <E1AAlDD-0006kK-00@auric.debian.org>
Sender: Randall Donald <rdonald@auric.debian.org>
Date: Sat, 18 Oct 2003 03:09:19 -0400
Delivered-To: 214601-close@bugs.debian.org
Source: qtl
Source-Version: 0.97.21-1
We believe that the bug you reported is fixed in the latest version of
qtl, which is due to be installed in the Debian FTP archive:
qtl_0.97.21-1.diff.gz
to pool/main/q/qtl/qtl_0.97.21-1.diff.gz
qtl_0.97.21-1.dsc
to pool/main/q/qtl/qtl_0.97.21-1.dsc
qtl_0.97.21.orig.tar.gz
to pool/main/q/qtl/qtl_0.97.21.orig.tar.gz
r-cran-qtl_0.97.21-1_i386.deb
to pool/main/q/qtl/r-cran-qtl_0.97.21-1_i386.deb
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 214601@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Steffen Moeller <moeller@pzr.uni-rostock.de> (supplier of updated qtl package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.7
Date: Tue, 8 Oct 2003 09:02:03 +0100
Source: qtl
Binary: r-cran-qtl
Architecture: source i386
Version: 0.97.21-1
Distribution: unstable
Urgency: low
Maintainer: Steffen Moeller <moeller@pzr.uni-rostock.de>
Changed-By: Steffen Moeller <moeller@pzr.uni-rostock.de>
Description:
r-cran-qtl - [Biology] GNU R package for genetic marker linkage analysis
Closes: 214601
Changes:
qtl (0.97.21-1) unstable; urgency=low
.
* Initial Debian Release (closes: #214601)
Files:
3b02371ca35f3e6d2175c40763f0b655 597 math optional qtl_0.97.21-1.dsc
fece97e949980e48f22dbaf70f17242f 577447 math optional qtl_0.97.21.orig.tar.gz
d8576358c9a5bb30c868363f01c4f406 2233 math optional qtl_0.97.21-1.diff.gz
5f88d85ec243298cec683574c480b2e3 496598 math optional r-cran-qtl_0.97.21-1_i386.deb
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