Bug#169859: RFP: bioconductor -- Analysis of genomic data based on GNU R
Package: wnpp
Version: N/A; reported 2002-11-20
Severity: wishlist
* Package name : bioconductor
Version : 1.1
Upstream Author : Robert Gentleman, A.J. Rossini, and Sandrine Dudoit <bioconductor@stat.math.ethz.ch>
* URL : http://www.bioconductor.org/
* License : GPL
Description : Analysis of genomic data based on GNU R
This package would be of interest for the Debian-Med project.
Version 1.1 features:
=====================
* All packages from the 1.0 release are included. All current bug
fixes have been applied, and most have upgraded and provide
enhanced functionality.
* New packages and major upgrades for release 1.1: affy:
read.MIAME, a widget for entering phenoData. expresso, a
flexible function for computing expression measures as well as
providing widgets to choose among options in the various steps
of preprocessing. rma, a fast and efficient function to compute
the multi-array average expression measure.
* Biobase: vignette and openVignette, functions to give users
greater interaction with package vignettes from the R command
line.
* graph: A new package that provides classes & tools to handle
graph objects in R.
* hexbin: A new package which includes binning functions, in
particular hexagonal bins for graphing
* marrayTools: A new package with miscellaneous functions use in
the functional genomics core facility in UCB
* reposTools: A new package that provides tools for dealing with
file repositories, which allow users to easily install, update
and distribute packages, vignettes and other files.
* tkWidgets: vExplorer, a powerful tool designed to allow users to
interact with vignette documentation in a hands on manner.
* vsn: A new package providing calibration and variance
stabilizing transformations for DNA array data.
-- System Information
Debian Release: 3.0
Architecture: i386
Kernel: Linux wr-linux02 2.4.17 #1 Mit Jan 23 14:00:21 CET 2002 i686
Locale: LANG=de_DE@euro, LC_CTYPE=de_DE@euro
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