Bug#163377: marked as done (ITP: pdb2dhl -- Convert PDB files to dihedral angle/ECEPPAK input file format)
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and subject line Bug#163377: fixed in pdb2dhl 1.0.0-1
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From: "David Nusinow" <krmt1984@ucla.edu>
To: "Debian Bug Tracking System" <submit@bugs.debian.org>
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Subject: ITP: pdb2dhl -- Convert PDB files to dihedral angle/ECEPPAK input
file format
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Date: Fri, 04 Oct 2002 19:50:13 -0700
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Package: wnpp
Version: unavailable; reported 2002-10-04
Severity: wishlist
* Package name : pdb2dhl
Version : 1.0.0
Upstream Author : Farokh Jamalyaria <farokhj@yahoo.com>
* URL : http://csweb1.cs.tamu.edu/people/f0j0838/bioinfo.htm
* License : GPL
Description : Convert PDB files to dihedral angle/ECEPPAK input file format
This package automates conversion of files in the Protein Databank (PDB) format to ECEPPAK input files. The C++ program pdb2dhl takes as input a polypeptide sequence's PDB file and produces as output a file containing the dihedral angle description of the polypeptide (in the correct ECEPPAK $GEOM field format) and also a file containing the amino acid sequence (in the correct ECEPPAK $SEQ field format).
-- System Information:
Debian Release: testing/unstable
Architecture: i386
Kernel: Linux ProteinBoy 2.4.17 #1 Sat Feb 2 17:59:58 PST 2002 i686
Locale: LANG=C, LC_CTYPE=C
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From: David Nusinow <krmt1984@ucla.edu>
To: 163377-close@bugs.debian.org
X-Katie: lisa $Revision: 1.19 $
Subject: Bug#163377: fixed in pdb2dhl 1.0.0-1
Message-Id: <E18COjK-0001H5-00@auric.debian.org>
Sender: James Troup <troup@auric.debian.org>
Date: Thu, 14 Nov 2002 13:28:42 -0500
Delivered-To: 163377-close@bugs.debian.org
We believe that the bug you reported is fixed in the latest version of
pdb2dhl, which is due to be installed in the Debian FTP archive:
pdb2dhl_1.0.0-1.diff.gz
to pool/main/p/pdb2dhl/pdb2dhl_1.0.0-1.diff.gz
pdb2dhl_1.0.0-1.dsc
to pool/main/p/pdb2dhl/pdb2dhl_1.0.0-1.dsc
pdb2dhl_1.0.0-1_i386.deb
to pool/main/p/pdb2dhl/pdb2dhl_1.0.0-1_i386.deb
pdb2dhl_1.0.0.orig.tar.gz
to pool/main/p/pdb2dhl/pdb2dhl_1.0.0.orig.tar.gz
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 163377@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
David Nusinow <krmt1984@ucla.edu> (supplier of updated pdb2dhl package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.7
Date: Sun, 6 Oct 2002 19:51:44 -0700
Source: pdb2dhl
Binary: pdb2dhl
Architecture: source i386
Version: 1.0.0-1
Distribution: unstable
Urgency: low
Maintainer: David Nusinow <krmt1984@ucla.edu>
Changed-By: David Nusinow <krmt1984@ucla.edu>
Description:
pdb2dhl - Convert PDB files to dihedral angle/ECEPPAK input file format
Closes: 163377
Changes:
pdb2dhl (1.0.0-1) unstable; urgency=low
.
* Initial Release; closes: #163377
* Included a new manpage.
* Added command line switches as detailed in the manpages.
* Added help and version number commands.
* Added prompts to interface when no values are given on execution.
Files:
311c0a41b586c00a217501bc0cc397cd 576 science optional pdb2dhl_1.0.0-1.dsc
e75e6d5592e1b66089bb6d8190d2099b 40240 science optional pdb2dhl_1.0.0.orig.tar.gz
d20f1819169bd347c3200598b3ce3a7a 5299 science optional pdb2dhl_1.0.0-1.diff.gz
838de34cd7f75bae33510fab85080a39 67008 science optional pdb2dhl_1.0.0-1_i386.deb
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