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Bug#1023731: BioC Transition blocked by new dependencies



On 2022-11-24 07:52:37 +0100, Andreas Tille wrote:
> Am Tue, Nov 22, 2022 at 08:54:13PM +0100 schrieb Andreas Tille:
> > If I understood that BioConductor packages should not block other
> > transitions.  I've just pinged ftpmaster on IRC to check packages
> > r-bioc-bsseq, r-bioc-dss, r-bioc-biocbaseutils and r-cran-ggrastr.
> > The following packages are blocked by the packages in new:
> > 
> >    r-bioc-bitseq - should be removed from testing immediately bug just filed)
> >    r-bioc-multiassayexperiment
> >    r-bioc-demixt (bug #1024597 was just filed)
> >    r-bioc-scater
> >    r-bioc-mofa (just due dependencies)
> > 
> > Do you want me to file RC bugs against r-bioc-multiassayexperiment,
> > r-bioc-scater and r-bioc-mofa.
> 
> Since r-bioc-scater is needed in autopkgtest of r-bioc-bluster[1] and
> r-bioc-singler[2] probably also these two packages need a RC bug to not
> block the transition.
> 
> The test suite issue of r-bioc-structuralvariantannotation is discussed
> with upstream[4].  I'm fine to remove it from testing for the moment as
> well.
>  
> Just let me know whether I should file the according bugs.

Please do.

Cheers
-- 
Sebastian Ramacher


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