Nanopolish: gcc-7 issue solved, but immintrin.h missing on most architectures
control: tags -1 help
Hi,
the gcc-7 issue of nanopolish described in latest upstream (0.8.1) which
is now in unstable but according to the build logs[1] on most architecture
the build fails with
...
cc -o src/thirdparty/scrappie/scrappie_common.o -c -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC src/thirdparty/scrappie/scrappie_common.c
In file included from src/thirdparty/scrappie/scrappie_common.c:3:0:
src/thirdparty/scrappie/util.h:4:14: fatal error: immintrin.h: No such file or directory
# include <immintrin.h>
^~~~~~~~~~~~~
compilation terminated.
...
On amd64 this is provided by libgcc-*-dev package - how to build the
package on those other architectures?
Strangely enough on i386 the build fails with
/usr/bin/ld: cannot find -lhdf5
which I do not understand as well ...
Thanks for any help
Andreas.
[1] https://buildd.debian.org/status/package.php?p=nanopolish
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