Bug#1008128: marked as done (ITP: gatk-fermilite -- interface to call Heng Li's fermi-lite assembler from Java code)
Your message dated Tue, 05 Apr 2022 18:00:13 +0000
with message-id <E1nbnTR-0008ij-2r@fasolo.debian.org>
and subject line Bug#1008128: fixed in gatk-fermilite 1.2.1+dfsg-1
has caused the Debian Bug report #1008128,
regarding ITP: gatk-fermilite -- interface to call Heng Li's fermi-lite assembler from Java code
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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1008128: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1008128
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--- Begin Message ---
- To: Debian Bug Tracking System <submit@bugs.debian.org>
- Subject: ITP: gatk-fermilite -- interface to call Heng Li's fermi-lite assembler from Java code
- From: Pierre Gruet <pgt@debian.org>
- Date: Tue, 22 Mar 2022 22:53:44 +0100
- Message-id: <164798602444.79702.14352106589573744370.reportbug@mendelssohn>
Package: wnpp
Severity: wishlist
Owner: Debian-med team <debian-med@lists.debian.org>
X-Debbugs-Cc: debian-devel@lists.debian.org, debian-med@lists.debian.org
* Package name : gatk-fermilite
Version : 1.2.1
Upstream Author : Broad Institute
* URL : https://github.com/broadinstitute/gatk-fermilite-jni
* License : BSD-3-clause
Programming Lang: Java, C
Description : interface to call Heng Li's fermi-lite assembler from Java code
Fml-asm (fermi-lite assembler) is a command-line tool for assembling Illumina
short reads in regions from 100bp to 10 million bp in size, based on the
fermi-lite library.
gatk-fermilite provides a Java library and a shared library to allow one to use
fermilite from Java code.
The package will be team-maintained inside Debian-med team. It is needed as a
dependency of the packaging target gatk.
--- End Message ---
--- Begin Message ---
Source: gatk-fermilite
Source-Version: 1.2.1+dfsg-1
Done: Pierre Gruet <pgt@debian.org>
We believe that the bug you reported is fixed in the latest version of
gatk-fermilite, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1008128@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Pierre Gruet <pgt@debian.org> (supplier of updated gatk-fermilite package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 25 Mar 2022 21:43:37 +0100
Source: gatk-fermilite
Binary: libgatk-fermilite-java libgatk-fermilite-jni libgatk-fermilite-jni-dbgsym
Architecture: source all amd64
Version: 1.2.1+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Pierre Gruet <pgt@debian.org>
Description:
libgatk-fermilite-java - interface to call Heng Li's fermi-lite assembler from Java code
libgatk-fermilite-jni - interface to call Heng Li's fermi-lite assembler from Java code (
Closes: 1008128
Changes:
gatk-fermilite (1.2.1+dfsg-1) unstable; urgency=medium
.
* Initial release (Closes: #1008128)
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