New versions of htslib, samtools, bcftools and python-pysam in experimental - at least one package jellyfish does not work with these
- To: Debian Med Project List <debian-med@lists.debian.org>
- Subject: New versions of htslib, samtools, bcftools and python-pysam in experimental - at least one package jellyfish does not work with these
- From: Andreas Tille <andreas@an3as.eu>
- Date: Tue, 7 Dec 2021 16:37:43 +0100
- Message-id: <Ya9/xwfsFdC77Cv9@an3as.eu>
Hi,
we probably need to do some htslib and friends transition. I tried to
run `ratt` on the new htslib version but my bad luck to setup sbuild is
beating me all the time and I failed. However, I manually tried to
rebuild jellyfish which has a high popcon and this fails with two build
time tests with the new libhts-dev package.
Anyone with some spare cycles is welcome to check and fix the issue.
Kind regards
Andreas.
--
http://fam-tille.de
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