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Bug#983239: marked as done (libbio-db-ncbihelper-perl: (autopkg)test failures when network is available)

Your message dated Mon, 22 Feb 2021 23:12:17 +0100
with message-id <YDQsQe2JZVFrBbmC@fusion>
and subject line closing 983239 affecting libbio-db-ncbihelper-perl
has caused the Debian Bug report #983239,
regarding libbio-db-ncbihelper-perl: (autopkg)test failures when network is available
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
983239: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=983239
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Source: libbio-db-ncbihelper-perl
Version: 1.7.6-2
Severity: serious
Justification: autopkgtest is relevant, network access is a policy violation

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As seen on ci.d.n:
https://ci.debian.net/data/autopkgtest/testing/amd64/libb/libbio-db-ncbihelper-perl/10589853/log.gz

we have a test failure:

not ok 44

#   Failed test at t/Taxonomy.t line 102.
#          got: 'Actinomycetia'
#     expected: 'Actinobacteria'


This happens because internet access is available, and internet using
tests are disabled during not disabeld.

I think they are supposed to be disabled during build, but this
doesn't seem to work either:

t/EntrezGene.t ......... skipped: no host: www.google.com
t/GenBank.t ............ skipped: no host: www.google.com
t/GenPept.t ............ skipped: no host: www.google.com
t/Query-Genbank.t ...... skipped: no host: www.google.com
t/RefSeq.t ............. skipped: no host: www.google.com
t/Taxonomy.t ........... skipped: no host: www.google.com

means that libtest-requiresinternet-perl doesn't find internet access
(expected in my chroot), whereas it would output something different
if NO_NETWORK_TESTING was respected. (Also: what is --network
supposed to do?)

With

override_dh_auto_test:
	NO_NETWORK_TESTING=1 dh_auto_test

we get:

t/EntrezGene.t ......... skipped: NO_NETWORK_TESTING
t/GenBank.t ............ skipped: NO_NETWORK_TESTING
t/GenPept.t ............ skipped: NO_NETWORK_TESTING
t/Query-Genbank.t ...... skipped: NO_NETWORK_TESTING
t/RefSeq.t ............. skipped: NO_NETWORK_TESTING
t/Taxonomy.t ........... skipped: NO_NETWORK_TESTING


Summary:
- - the tests try to go out to the internet (policy violation during
  build)
- - if this succeeds the build fails (which doesn't happen in
  restricted chroots)
- - autopkgtests fail
- - setting NO_NETWORK_TESTING=1 in d/rules help
- - doing the same in debian/tests/pkg-perl/smoke-env fixes the
  autopkgtest failure


Cheers,
gregor
  

- -- System Information:
Debian Release: bullseye/sid
  APT prefers unstable
  APT policy: (990, 'unstable'), (500, 'unstable-debug'), (500, 'oldoldstable'), (500, 'experimental'), (500, 'testing'), (500, 'stable'), (500, 'oldstable')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 5.10.0-3-amd64 (SMP w/4 CPU threads)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=C, LC_CTYPE=de_AT.utf8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /bin/bash
Init: sysvinit (via /sbin/init)
LSM: AppArmor: enabled

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--- End Message ---
--- Begin Message --- 
Version: 1.7.6-3

The build time test is now done with NO_NETWORK_TESTING=1, so
that prevents the test to fetch data over the Internet, thus
fixing the policy violation.
-- 
Étienne Mollier <etienne.mollier@mailoo.org>
Fingerprint:  8f91 b227 c7d6 f2b1 948c  8236 793c f67e 8f0d 11da
Sent from /dev/pts/3, please excuse my verbosity.

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