Hi Andreas, I am happy that you asked - it is here https://salsa.debian.org/med-team/ksw2 Sadly not a problem of that library which features the same files that are also distributed with minimap2, just as an older version in the separate ksw2 repository if I am not erroneous. We need to find the problem within the minimap2 package, I am afraid. Was looking for a while now - thought multiple times that I had it - but ... sigh. That ksw2 library needs some love by upstream and I suggest to avoid packaging it for now. Also, it does not ship with a license and comes with the sources of a journal publication - er - have a look. Thanks, Steffen On 14.05.20 23:18, Andreas Tille wrote:
Hi Steffen, could you push to Salsa soon? Kind regards Andreas. On Thu, May 14, 2020 at 05:50:46PM +0200, Andreas Tille wrote:Hi Steffen, On Thu, May 14, 2020 at 05:29:15PM +0200, Steffen Möller wrote:I was about to help out the minimap2's "mappy" python interface which has a dependeny on https://github.com/lh3/ksw2 that to my understanding yet did not find entry to our distribution. Nobody is working on this, right? I'd then come up with something.Ahhh, yes, seems I missed this real point of the build issue. Thanks for spotting and please push that package if you have time for it. Kind regards Andreas. -- http://fam-tille.de