Re: Packaging fsa for Debian
Ping,
is there any active development of fsa and could anybody please answer
the questions below?
Kind regards
Andreas.
On Mon, Aug 18, 2014 at 03:11:24PM +0200, Andreas Tille wrote:
> Hi,
>
> I'm writing you on behalf of the Debian Med team which is interested in
> packaging fsa for Debian since it fits nicely into all other software we
> assembled for biological research inside main Debian[1]. Specifically
> the fact that it is recommended when using t-coffee has inspired me to
> do the packaging work.
>
> The Debian build process is designet to run a test suite if available
> and so it also tried to run the tests target of fsa. However, it seems
> you do not provided the files needed to run the test suite in your
> download tarball. I just got:
>
> No rule to make target 'apps/isect_d.unmappable.bash', needed by 'apps/isect_d.unmappable.bash.log'. Stop.
>
> Is there any chance to include the full or at least a stripped down test
> suite into the tarball?
>
> Moreover I tried to create manpages for all binaries which were created
> by the build process via help2man. However I failed for the following
> executables
>
> isect_mercator_alignment_gff
> map_coords
> map_gff_coords
> slice_mercator_alignment
>
> Simply calling these scripts either plain or with --help option endet up
> in
>
> Segmentation fault
>
> I think this should be fixed.
>
> Kind regards and thanks for providing fsa as free software
>
> Andreas.
>
> [1] http://blends.debian.org/med/tasks/bio#fsa
>
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>
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