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Bug#974879: marked as done (ITP: intervalstorej -- Java implementation of the Nested Containment List data structure)

Your message dated Sat, 21 Nov 2020 22:00:09 +0000
with message-id <E1kgavR-000Iiz-UZ@fasolo.debian.org>
and subject line Bug#974879: fixed in intervalstorej 1.2+dfsg-1
has caused the Debian Bug report #974879,
regarding ITP: intervalstorej -- Java implementation of the Nested Containment List data structure
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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974879: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=974879
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Debian Java team <debian-java@lists.debian.org>
X-Debbugs-Cc: debian-devel@lists.debian.org, debian-java@lists.debian.org

* Package name    : intervalstorej
  Version         : 1.2
  Upstream Author : Mungo Carstairs, Barton Group
* URL             : https://github.com/bartongroup/IntervalStoreJ/
* License         : BSD-3-clause
  Programming Lang: Java
  Description     : Java implementation of the Nested Containment List data structure

NCList provides efficient lookup of intervals overlapping a given range in
time O(M log N) where N is the number of intervals stored, and M the number
of overlaps found.

- is parameterised by <T extends IntervalI>;
- so can store any Java type that implements IntervalI, that is, has methods
 getBegin() and getEnd() (where begin <= end);
- extends java.util.AbstractCollection<T>;
- may be referred to as Collection<T> in code;
- exposes methods for add, contains, remove, iterator, size etc;
- has a 'bulk load' constructor, and methods to add or remove entries, while
 retaining lookup efficiency;
- optimises storage and search of sparsely nested intervals by storing
 non-nested intervals separately;
- incorporates NCList to store any properly nested intervals.

This package is needed as a dependency of jalview, which is currently updated
as we have a quite old version of it in Debian. jalview now relies on it.

It will be maintained inside the Debian Java team.

--- End Message ---
--- Begin Message ---
Source: intervalstorej
Source-Version: 1.2+dfsg-1
Done: Pierre Gruet <pgtdebian@free.fr>

We believe that the bug you reported is fixed in the latest version of
intervalstorej, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 974879@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
Pierre Gruet <pgtdebian@free.fr> (supplier of updated intervalstorej package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)

Hash: SHA256

Format: 1.8
Date: Sun, 15 Nov 2020 23:06:45 +0100
Source: intervalstorej
Binary: libintervalstorej-java
Architecture: source all
Version: 1.2+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Java Maintainers <pkg-java-maintainers@lists.alioth.debian.org>
Changed-By: Pierre Gruet <pgtdebian@free.fr>
 libintervalstorej-java - Java implementation of the Nested Containment List data structure
Closes: 974879
 intervalstorej (1.2+dfsg-1) unstable; urgency=medium
   * Initial release (Closes: #974879)
 9fc486cffdf6bbbd7e1967fee4762d0540178610 2270 intervalstorej_1.2+dfsg-1.dsc
 83f6a5b70d4ebe90785e9da477d05a0bb3b3300b 1577692 intervalstorej_1.2+dfsg.orig.tar.xz
 311a298b4aa39d60ef84345a93919a61ad58f015 4080 intervalstorej_1.2+dfsg-1.debian.tar.xz
 65687ed7f6c19e7cefee61c8974520cf36a820f0 9685 intervalstorej_1.2+dfsg-1_amd64.buildinfo
 ff7991a09f1f52923e99d4adef816790dc74ed26 25384 libintervalstorej-java_1.2+dfsg-1_all.deb
 a1141c5c4107c7fd536e25973fc5240d75b9fff97dbd3b148d40de655fc69ce5 2270 intervalstorej_1.2+dfsg-1.dsc
 07b2f89cb8d523a4b8beee1d75ec728bee4f38e542f5b2a2769d95728626ef4f 1577692 intervalstorej_1.2+dfsg.orig.tar.xz
 6557863ef22ca5f0d7b095eb89474c63f2faf934bbaf8d83397baeda6c97c4c9 4080 intervalstorej_1.2+dfsg-1.debian.tar.xz
 3fa89b8061450fdede4266462435c9b263837f2ff9338d515693181135be9b55 9685 intervalstorej_1.2+dfsg-1_amd64.buildinfo
 76f59381309d8d3ff864e3831dc37760af5e52b05e5fd1b347f51b935ecdd831 25384 libintervalstorej-java_1.2+dfsg-1_all.deb
 f57fd03f796d57396aec75adf75e8f47 2270 java optional intervalstorej_1.2+dfsg-1.dsc
 c781a2b877c652e701ded1830cc70ac0 1577692 java optional intervalstorej_1.2+dfsg.orig.tar.xz
 df078b1fd6c1c281c185e515cb4e916f 4080 java optional intervalstorej_1.2+dfsg-1.debian.tar.xz
 124686423a132de1104c27bd0033db9f 9685 java optional intervalstorej_1.2+dfsg-1_amd64.buildinfo
 1f43451d561890583ef975029b3c51dd 25384 java optional libintervalstorej-java_1.2+dfsg-1_all.deb



--- End Message ---

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