Bug#807415: ITP: gwamar -- genome-wide assessment of mutations associated with drug resistance in bacteria
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>
* Package name : gwamar
Version : 1.15.1
Upstream Author : Michał Woźniak <m.wozniak@mimuw.edu.pl>
* URL : http://bioputer.mimuw.edu.pl/gwamar/
* License : GPL
Programming Lang: Python
Description : genome-wide assessment of mutations associated with drug resistance in bacteria
GWAMAR is a tool for detecting of drug resistance-associated mutations
in bacteria through comparative analysis of whole-genome sequences. The
pipeline of GWAMAR comprises several steps. First, for a set of closely
related bacterial genomes, it employs eCAMBer to identify homologous
gene families. Second, based on multiple alignments of the gene
families, it identifies mutations among the strains of interest. Third,
it calculates several statistics to identify which mutations are the
most associated with drug resistance.
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