Source: binoculars Version: 0.0.6-1 Severity: serious X-Debbugs-CC: debian-ci@lists.debian.org Tags: sid bookworm User: debian-ci@lists.debian.org Usertags: needs-update Control: affects -1 src:python3-defaults Dear maintainer(s),With a recent upload of python3-defaults the autopkgtest of binoculars fails in testing when that autopkgtest is run with the binary packages of python3-defaults from unstable. It passes when run with only packages from testing. In tabular form:
pass fail
python3-defaults from testing 3.9.8-1
binoculars from testing 0.0.6-1
all others from testing from testing
I copied some of the output at the bottom of this report. It seems
you're testing for all supported Python3 version in Debian, but one of
your dependencies doesn't provide the required extensions (bug #951300).
Either convince the maintainer of that package to build the extensions,
or only test with the default Python3 version.
Currently this regression is blocking the migration of python3-defaults to testing [1].
More information about this bug and the reason for filing it can be found on https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation Paul [1] https://qa.debian.org/excuses.php?package=python3-defaults https://ci.debian.net/data/autopkgtest/testing/amd64/b/binoculars/17344284/log.gz Testing with python3.10: test_IO (test_cfg.TestCase) ... ok test_id03 (unittest.loader._FailedTest) ... ERROR test_metadata (unittest.loader._FailedTest) ... ERROR ====================================================================== ERROR: test_id03 (unittest.loader._FailedTest) ---------------------------------------------------------------------- ImportError: Failed to import test module: test_id03 Traceback (most recent call last):File "/usr/lib/python3/dist-packages/vtk/vtkCommonCore.py", line 5, in <module>
from .vtkCommonCorePython import *
ModuleNotFoundError: No module named 'vtk.vtkCommonCorePython'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/lib/python3.10/unittest/loader.py", line 436, in
_find_test_path
module = self._get_module_from_name(name)
File "/usr/lib/python3.10/unittest/loader.py", line 377, in
_get_module_from_name
__import__(name)
File
"/tmp/autopkgtest-lxc.73x5fv_7/downtmp/autopkgtest_tmp/tests/test_id03.py",
line 1, in <module>
from binoculars.backends import id03
File "/usr/lib/python3/dist-packages/binoculars/backends/id03.py",
line 10, in <module>
from .. import backend, errors, util
File "/usr/lib/python3/dist-packages/binoculars/backend.py", line 1,
in <module>
from . import util, errors, dispatcher
File "/usr/lib/python3/dist-packages/binoculars/dispatcher.py", line
9, in <module>
from . import util, errors, space
File "/usr/lib/python3/dist-packages/binoculars/space.py", line 13,
in <module>
from vtk import vtkImageData, vtkXMLImageDataWriter
File "/usr/lib/python3/dist-packages/vtk/__init__.py", line 41, in
<module>
from .vtkCommonCore import *
File "/usr/lib/python3/dist-packages/vtk/vtkCommonCore.py", line 9,
in <module>
from vtkCommonCorePython import *
ModuleNotFoundError: No module named 'vtkCommonCorePython'
======================================================================
ERROR: test_metadata (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test_metadata
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/vtk/vtkCommonCore.py", line 5,
in <module>
from .vtkCommonCorePython import *
ModuleNotFoundError: No module named 'vtk.vtkCommonCorePython'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/lib/python3.10/unittest/loader.py", line 436, in
_find_test_path
module = self._get_module_from_name(name)
File "/usr/lib/python3.10/unittest/loader.py", line 377, in
_get_module_from_name
__import__(name)
File
"/tmp/autopkgtest-lxc.73x5fv_7/downtmp/autopkgtest_tmp/tests/test_metadata.py",
line 2, in <module>
import binoculars.space
File "/usr/lib/python3/dist-packages/binoculars/space.py", line 13,
in <module>
from vtk import vtkImageData, vtkXMLImageDataWriter
File "/usr/lib/python3/dist-packages/vtk/__init__.py", line 41, in
<module>
from .vtkCommonCore import *
File "/usr/lib/python3/dist-packages/vtk/vtkCommonCore.py", line 9,
in <module>
from vtkCommonCorePython import *
ModuleNotFoundError: No module named 'vtkCommonCorePython'
----------------------------------------------------------------------
Ran 3 tests in 0.022s
FAILED (errors=2)
ConfigFile{
[dispatcher]
destination = b'demo_{first}-{last}.hdf5'
overwrite = b'true'
type = b'local'
[projection]
resolution = b'0.002, 0.002, 1'
type = b'id03:hklprojection'
[input]
centralpixel = b'40, 255'
imagefolder = b'/path/to/data/images/{rUCCD[0]}/'
pixelsize = b'0.055, 0.055'
sdd = b'1050'
specfile = b'/path/to/data/file.spec'
target_weight = b'4000'
type = b'id03:eh1'
xmask = b'50-235'
ymask = b'185-253,262-400'
}
origin = test.hdf5
command = autopkgtest [20:13:55]: test command1
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