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Disk Controller detected with i686 kernel but not AMD64 kernel



I'm trying to install Debian Lenny on some Dell R610s but I've been having
some major issues with the installation when trying to install with an
AMD64 architecture kernel. I've also tried apt-get installing the amd64
kernel and selecting it at boot time but the system is unable to find the
disks then too and halts when trying to start up the software raid on the
disks.

The system I have is using an LSI Logic SAS1068E PCI-Express RAID
controller and the controller is correctly detected using the i686 Lenny
kernel.

I've attached output of lspci -v to this e-mail from the system running
i686 debian. Getting anything out of the amd64 is a right pain though
because it seems that various other devices aren't properly being detected.
For example, I've been unable to get a USB pen drive to be detected and
thus mounted and I've not been able to get the NIC firmware loaded
(Broadcom bnx2 firmware required).
Since I'm unable to get any form of internal or external media mounted and
the NIC isn't being properly detected, I've got no way of getting output of
any commands easily off the server except page-by-page over serial.

Has anyone else experience this issue, and are there any workarounds?

I believe that the issue is discussed in two live Debian bugs (#528351 and
#526525) but there seems to be some disparity over where people believe the
bug to be.

I've also been having issues with getting the keyboard working during the
installer and have to use the remove KVM and specify noapic,nolapic as
kernel options to the installer. Any use of USB keyboard seems to hang the
system.

Thanks in advance,

Andrew Nicols

-- 
Systems Developer

e: andrew.nicols@luns.net.uk
im: a.nicols@jabber.lancs.ac.uk
t: +44 (0)1524 5 10147

Lancaster University Network Services is a limited company registered in
England and Wales. Registered number: 4311892. Registered office:
University House, Lancaster University, Lancaster, LA1 4YW
00:00.0 Host bridge: Intel Corporation QuickPath Architecture I/O Hub to ESI Port (rev 13)
	Subsystem: Dell Device 0236
	Flags: fast devsel, IRQ 15
	Capabilities: [60] Message Signalled Interrupts: Mask+ 64bit- Queue=0/1 Enable-
	Capabilities: [90] Express Root Port (Slot-), MSI 00
	Capabilities: [e0] Power Management version 3
	Capabilities: [100] Advanced Error Reporting <?>
	Capabilities: [150] Access Controls <?>
	Capabilities: [160] Vendor Specific Information <?>

00:01.0 PCI bridge: Intel Corporation QuickPath Architecture I/O Hub PCI Express Root Port 1 (rev 13) (prog-if 00 [Normal decode])
	Flags: bus master, fast devsel, latency 0
	Bus: primary=00, secondary=01, subordinate=01, sec-latency=0
	Memory behind bridge: d6000000-d9ffffff
	Capabilities: [40] Subsystem: Dell Device 0236
	Capabilities: [60] Message Signalled Interrupts: Mask+ 64bit- Queue=0/1 Enable+
	Capabilities: [90] Express Root Port (Slot-), MSI 00
	Capabilities: [e0] Power Management version 3
	Capabilities: [100] Advanced Error Reporting <?>
	Capabilities: [150] Access Controls <?>
	Capabilities: [160] Vendor Specific Information <?>
	Kernel driver in use: pcieport-driver
	Kernel modules: shpchp

00:03.0 PCI bridge: Intel Corporation QuickPath Architecture I/O Hub PCI Express Root Port 3 (rev 13) (prog-if 00 [Normal decode])
	Flags: bus master, fast devsel, latency 0
	Bus: primary=00, secondary=02, subordinate=02, sec-latency=0
	Memory behind bridge: da000000-ddffffff
	Capabilities: [40] Subsystem: Dell Device 0236
	Capabilities: [60] Message Signalled Interrupts: Mask+ 64bit- Queue=0/1 Enable+
	Capabilities: [90] Express Root Port (Slot-), MSI 00
	Capabilities: [e0] Power Management version 3
	Capabilities: [100] Advanced Error Reporting <?>
	Capabilities: [150] Access Controls <?>
	Capabilities: [160] Vendor Specific Information <?>
	Kernel driver in use: pcieport-driver
	Kernel modules: shpchp

00:07.0 PCI bridge: Intel Corporation QuickPath Architecture I/O Hub PCI Express Root Port 7 (rev 13) (prog-if 00 [Normal decode])
	Flags: bus master, fast devsel, latency 0
	Bus: primary=00, secondary=04, subordinate=04, sec-latency=0
	Capabilities: [40] Subsystem: Dell Device 0236
	Capabilities: [60] Message Signalled Interrupts: Mask+ 64bit- Queue=0/1 Enable+
	Capabilities: [90] Express Root Port (Slot+), MSI 00
	Capabilities: [e0] Power Management version 3
	Capabilities: [100] Advanced Error Reporting <?>
	Capabilities: [150] Access Controls <?>
	Capabilities: [160] Vendor Specific Information <?>
	Kernel driver in use: pcieport-driver
	Kernel modules: shpchp

00:09.0 PCI bridge: Intel Corporation QuickPath Architecture I/O Hub PCI Express Root Port 9 (rev 13) (prog-if 00 [Normal decode])
	Flags: bus master, fast devsel, latency 0
	Bus: primary=00, secondary=05, subordinate=05, sec-latency=0
	Capabilities: [40] Subsystem: Dell Device 0236
	Capabilities: [60] Message Signalled Interrupts: Mask+ 64bit- Queue=0/1 Enable+
	Capabilities: [90] Express Root Port (Slot+), MSI 00
	Capabilities: [e0] Power Management version 3
	Capabilities: [100] Advanced Error Reporting <?>
	Capabilities: [150] Access Controls <?>
	Kernel driver in use: pcieport-driver
	Kernel modules: shpchp

00:14.0 PIC: Intel Corporation QuickPath Architecture I/O Hub System Management Registers (rev 13) (prog-if 00 [8259])
	Flags: fast devsel
	Capabilities: [40] Express Root Complex Integrated Endpoint, MSI 00

00:14.1 PIC: Intel Corporation QuickPath Architecture I/O Hub GPIO and Scratch Pad Registers (rev 13) (prog-if 00 [8259])
	Flags: fast devsel
	Capabilities: [40] Express Root Complex Integrated Endpoint, MSI 00

00:14.2 PIC: Intel Corporation QuickPath Architecture I/O Hub Control Status and RAS Registers (rev 13) (prog-if 00 [8259])
	Flags: fast devsel
	Capabilities: [40] Express Root Complex Integrated Endpoint, MSI 00

00:1a.0 USB Controller: Intel Corporation 82801I (ICH9 Family) USB UHCI Controller #4 (rev 02) (prog-if 00 [UHCI])
	Subsystem: Dell Device 0236
	Flags: bus master, medium devsel, latency 0, IRQ 17
	I/O ports at ec40 [size=32]
	Capabilities: [50] PCIe advanced features <?>
	Kernel driver in use: uhci_hcd
	Kernel modules: uhci-hcd

00:1a.1 USB Controller: Intel Corporation 82801I (ICH9 Family) USB UHCI Controller #5 (rev 02) (prog-if 00 [UHCI])
	Subsystem: Dell Device 0236
	Flags: bus master, medium devsel, latency 0, IRQ 18
	I/O ports at ec60 [size=32]
	Capabilities: [50] PCIe advanced features <?>
	Kernel driver in use: uhci_hcd
	Kernel modules: uhci-hcd

00:1a.7 USB Controller: Intel Corporation 82801I (ICH9 Family) USB2 EHCI Controller #2 (rev 02) (prog-if 20 [EHCI])
	Subsystem: Dell Device 0236
	Flags: bus master, medium devsel, latency 0, IRQ 19
	Memory at df0ff800 (32-bit, non-prefetchable) [size=1K]
	Capabilities: [50] Power Management version 2
	Capabilities: [58] Debug port: BAR=1 offset=00a0
	Capabilities: [98] PCIe advanced features <?>
	Kernel driver in use: ehci_hcd
	Kernel modules: ehci-hcd

00:1c.0 PCI bridge: Intel Corporation 82801I (ICH9 Family) PCI Express Port 1 (rev 02) (prog-if 00 [Normal decode])
	Flags: bus master, fast devsel, latency 0
	Bus: primary=00, secondary=03, subordinate=03, sec-latency=0
	I/O behind bridge: 0000f000-0000ffff
	Memory behind bridge: df100000-df2fffff
	Capabilities: [40] Express Root Port (Slot-), MSI 00
	Capabilities: [80] Message Signalled Interrupts: Mask- 64bit- Queue=0/0 Enable+
	Capabilities: [90] Subsystem: Dell Device 0236
	Capabilities: [a0] Power Management version 2
	Capabilities: [100] Virtual Channel <?>
	Capabilities: [180] Root Complex Link <?>
	Kernel driver in use: pcieport-driver
	Kernel modules: shpchp

00:1d.0 USB Controller: Intel Corporation 82801I (ICH9 Family) USB UHCI Controller #1 (rev 02) (prog-if 00 [UHCI])
	Subsystem: Dell Device 0236
	Flags: bus master, medium devsel, latency 0, IRQ 21
	I/O ports at ec80 [size=32]
	Capabilities: [50] PCIe advanced features <?>
	Kernel driver in use: uhci_hcd
	Kernel modules: uhci-hcd

00:1d.1 USB Controller: Intel Corporation 82801I (ICH9 Family) USB UHCI Controller #2 (rev 02) (prog-if 00 [UHCI])
	Subsystem: Dell Device 0236
	Flags: bus master, medium devsel, latency 0, IRQ 20
	I/O ports at eca0 [size=32]
	Capabilities: [50] PCIe advanced features <?>
	Kernel driver in use: uhci_hcd
	Kernel modules: uhci-hcd

00:1d.7 USB Controller: Intel Corporation 82801I (ICH9 Family) USB2 EHCI Controller #1 (rev 02) (prog-if 20 [EHCI])
	Subsystem: Dell Device 0236
	Flags: bus master, medium devsel, latency 0, IRQ 21
	Memory at df0ffc00 (32-bit, non-prefetchable) [size=1K]
	Capabilities: [50] Power Management version 2
	Capabilities: [58] Debug port: BAR=1 offset=00a0
	Capabilities: [98] PCIe advanced features <?>
	Kernel driver in use: ehci_hcd
	Kernel modules: ehci-hcd

00:1e.0 PCI bridge: Intel Corporation 82801 PCI Bridge (rev 92) (prog-if 01 [Subtractive decode])
	Flags: bus master, fast devsel, latency 0
	Bus: primary=00, secondary=06, subordinate=06, sec-latency=32
	Memory behind bridge: de000000-deffffff
	Prefetchable memory behind bridge: 00000000d5800000-00000000d5ffffff
	Capabilities: [50] Subsystem: Dell Device 0236

00:1f.0 ISA bridge: Intel Corporation 82801IB (ICH9) LPC Interface Controller (rev 02)
	Subsystem: Dell Device 0236
	Flags: bus master, medium devsel, latency 0
	Capabilities: [e0] Vendor Specific Information <?>
	Kernel modules: iTCO_wdt

00:1f.2 IDE interface: Intel Corporation 82801IB (ICH9) 2 port SATA IDE Controller (rev 02) (prog-if 8f [Master SecP SecO PriP PriO])
	Subsystem: Dell Device 0236
	Flags: bus master, 66MHz, medium devsel, latency 0, IRQ 23
	I/O ports at ec10 [size=8]
	I/O ports at ec08 [size=4]
	I/O ports at ec18 [size=8]
	I/O ports at ec0c [size=4]
	I/O ports at ec20 [size=16]
	I/O ports at ec30 [size=16]
	Capabilities: [70] Power Management version 3
	Capabilities: [b0] PCIe advanced features <?>
	Kernel driver in use: ata_piix
	Kernel modules: ata_piix

01:00.0 Ethernet controller: Broadcom Corporation NetXtreme II BCM5709 Gigabit Ethernet (rev 20)
	Subsystem: Dell Device 0236
	Flags: bus master, fast devsel, latency 0, IRQ 36
	Memory at d6000000 (64-bit, non-prefetchable) [size=32M]
	Capabilities: [48] Power Management version 3
	Capabilities: [50] Vital Product Data <?>
	Capabilities: [58] Message Signalled Interrupts: Mask- 64bit+ Queue=0/4 Enable-
	Capabilities: [a0] MSI-X: Enable+ Mask- TabSize=9
	Capabilities: [ac] Express Endpoint, MSI 00
	Capabilities: [100] Device Serial Number ab-4d-57-fe-ff-19-22-00
	Capabilities: [110] Advanced Error Reporting <?>
	Capabilities: [150] Power Budgeting <?>
	Capabilities: [160] Virtual Channel <?>
	Kernel driver in use: bnx2
	Kernel modules: bnx2

01:00.1 Ethernet controller: Broadcom Corporation NetXtreme II BCM5709 Gigabit Ethernet (rev 20)
	Subsystem: Dell Device 0236
	Flags: bus master, fast devsel, latency 0, IRQ 48
	Memory at d8000000 (64-bit, non-prefetchable) [size=32M]
	Capabilities: [48] Power Management version 3
	Capabilities: [50] Vital Product Data <?>
	Capabilities: [58] Message Signalled Interrupts: Mask- 64bit+ Queue=0/4 Enable-
	Capabilities: [a0] MSI-X: Enable- Mask- TabSize=9
	Capabilities: [ac] Express Endpoint, MSI 00
	Capabilities: [100] Device Serial Number ad-4d-57-fe-ff-19-22-00
	Capabilities: [110] Advanced Error Reporting <?>
	Capabilities: [150] Power Budgeting <?>
	Capabilities: [160] Virtual Channel <?>
	Kernel driver in use: bnx2
	Kernel modules: bnx2

02:00.0 Ethernet controller: Broadcom Corporation NetXtreme II BCM5709 Gigabit Ethernet (rev 20)
	Subsystem: Dell Device 0236
	Flags: bus master, fast devsel, latency 0, IRQ 32
	Memory at da000000 (64-bit, non-prefetchable) [size=32M]
	Capabilities: [48] Power Management version 3
	Capabilities: [50] Vital Product Data <?>
	Capabilities: [58] Message Signalled Interrupts: Mask- 64bit+ Queue=0/4 Enable-
	Capabilities: [a0] MSI-X: Enable- Mask- TabSize=9
	Capabilities: [ac] Express Endpoint, MSI 00
	Capabilities: [100] Device Serial Number af-4d-57-fe-ff-19-22-00
	Capabilities: [110] Advanced Error Reporting <?>
	Capabilities: [150] Power Budgeting <?>
	Capabilities: [160] Virtual Channel <?>
	Kernel driver in use: bnx2
	Kernel modules: bnx2

02:00.1 Ethernet controller: Broadcom Corporation NetXtreme II BCM5709 Gigabit Ethernet (rev 20)
	Subsystem: Dell Device 0236
	Flags: bus master, fast devsel, latency 0, IRQ 42
	Memory at dc000000 (64-bit, non-prefetchable) [size=32M]
	Capabilities: [48] Power Management version 3
	Capabilities: [50] Vital Product Data <?>
	Capabilities: [58] Message Signalled Interrupts: Mask- 64bit+ Queue=0/4 Enable-
	Capabilities: [a0] MSI-X: Enable- Mask- TabSize=9
	Capabilities: [ac] Express Endpoint, MSI 00
	Capabilities: [100] Device Serial Number b1-4d-57-fe-ff-19-22-00
	Capabilities: [110] Advanced Error Reporting <?>
	Capabilities: [150] Power Budgeting <?>
	Capabilities: [160] Virtual Channel <?>
	Kernel driver in use: bnx2
	Kernel modules: bnx2

03:00.0 SCSI storage controller: LSI Logic / Symbios Logic SAS1068E PCI-Express Fusion-MPT SAS (rev 08)
	Subsystem: Dell SAS 6/iR Integrated RAID Controller
	Flags: bus master, fast devsel, latency 0, IRQ 218
	I/O ports at fc00 [size=256]
	Memory at df2ec000 (64-bit, non-prefetchable) [size=16K]
	Memory at df2f0000 (64-bit, non-prefetchable) [size=64K]
	Expansion ROM at df100000 [disabled] [size=1M]
	Capabilities: [50] Power Management version 2
	Capabilities: [68] Express Endpoint, MSI 00
	Capabilities: [98] Message Signalled Interrupts: Mask- 64bit+ Queue=0/0 Enable+
	Capabilities: [b0] MSI-X: Enable- Mask- TabSize=1
	Capabilities: [100] Advanced Error Reporting <?>
	Kernel driver in use: mptsas
	Kernel modules: mptsas

06:03.0 VGA compatible controller: Matrox Graphics, Inc. MGA G200eW WPCM450 [Hermon] - Winbond/Nuvoton (rev 0a) (prog-if 00 [VGA controller])
	Subsystem: Dell Device 0236
	Flags: bus master, medium devsel, latency 32, IRQ 10
	Memory at d5800000 (32-bit, prefetchable) [size=8M]
	Memory at de7fc000 (32-bit, non-prefetchable) [size=16K]
	Memory at de800000 (32-bit, non-prefetchable) [size=8M]
	[virtual] Expansion ROM at de000000 [disabled] [size=64K]
	Capabilities: [dc] Power Management version 1

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