Re: Clouds and NG sequencing
Le Tue, Jul 20, 2010 at 06:05:11AM +0000, Sri Girish Srinivasa Murthy a écrit :
>
> I am graduate student in Luebeck, where Steffen is also located, and mostly
> working in the (almost) neighbouring Max Planck Institute to study
> Microbioata in Skin and Gut of Mouse. As an Ubuntian I joined Debian Med two
> weeks or so ago and with Steffen I have done some packaging with the help of
> Steffen (denoiser,python-cogent, python-pynast, qiime, mothur), an upload
> only pending the confirmation of upstream that this is ok to redistribute
> from the respective Authors but they somehow seem to be all on vacation.
>
> I have strong interest to learn more about cloud computing and use it for NG
> sequencing and the data analysis. Steffen set up a server for this that I am
> going to share. Whoever on this list feels like discussing along, please drop
> me a quick Hello.
Hello Girish,
welcome in Debian Med, and many thanks for your help to increase our support
for high-throughput sequencing applications. Our packages are listed on our
‘web sentinel’ pages, but this does not indicate much how they fit together.
Do not hesitate to document on the Debian wiki how the packages you added can
be used as part of the same workflow. Also, we have an area on the main
website, that may be used as well—perhaps after a drafting phase on the wiki.
These pages are translated in many languages, so they are more suited for
non-specialists.
- The web sentinels: http://debian-med.alioth.debian.org/tasks/
- The Debian wiki: http://wiki.debian.org/DebianMed
- The Debian website: http://www.debian.org/devel/debian-med/
Have a nice day,
--
Charles Plessy
Debian Med packaging team,
http://www.debian.org/devel/debian-med
Tsurumi, Kanagawa, Japan
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