Bug#976789: ITP: r-bioc-purecn -- copy number calling and SNV classification using targeted short read sequencing
Package: wnpp
Severity: wishlist
Subject: ITP: r-bioc-purecn -- copy number calling and SNV classification using targeted short read sequencing
Package: wnpp
Owner: Steffen Moeller <moeller@debian.org>
Severity: wishlist
* Package name : r-bioc-purecn
Version : 1.20.0
Upstream Author : Markus Riester,
* URL : https://bioconductor.org/packages/PureCN/
* License : Artistic-2.0
Programming Lang: GNU R
Description : copy number calling and SNV classification using targeted short read sequencing
This package estimates tumor purity, copy number, and loss of
heterozygosity (LOH), and classifies single nucleotide variants (SNVs) by
somatic status and clonality. PureCN is designed for targeted short read
sequencing data, integrates well with standard somatic variant detection
and copy number pipelines, and has support for tumor samples without
matching normal samples.
Remark: This package is maintained by Debian R Packages Maintainers at
https://salsa.debian.org/r-pkg-team/r-bioc-purecn
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