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Bug#934597: marked as done (ITP: python-loompy -- access loom formatted files for bioinformatics)

Your message dated Mon, 06 Apr 2020 11:00:10 +0000
with message-id <E1jLPUA-000ApI-B9@fasolo.debian.org>
and subject line Bug#934597: fixed in python-loompy 3.0.6+dfsg-1
has caused the Debian Bug report #934597,
regarding ITP: python-loompy -- access loom formatted files for bioinformatics
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
934597: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=934597
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist

Subject: ITP: python-loompy -- access loom formatted files for bioinformatics
Package: wnpp
Owner: Steffen Moeller <moeller@debian.org>
Severity: wishlist

* Package name    : python-loompy
  Version         : 2.0.17
  Upstream Author : Linnarsson Lab
* URL             : https://github.com/linnarsson-lab/loompy
* License         : BSD-2-Clause
  Programming Lang: Python
  Description     : access loom formatted files for bioinformatics
 Loom is an efficient file format for very large omics datasets,
 consisting of a main matrix, optional additional layers, a variable
 number of row and column annotations. Loom also supports sparse
 graphs. We use loom files to store single-cell gene expression data:
 the main matrix contains the actual expression values (one column per
 cell, one row per gene); row and column annotations contain metadata
 for genes and cells, such as Name, Chromosome, Position (for genes),
 and Strain, Sex, Age (for cells).
 .
 Loom files (.loom) are created in the HDF5 file format, which supports
 an internal collection of numerical multidimensional datasets. HDF5
 is supported by many computer languages, including Java, MATLAB,
 Mathematica, Python, R, and Julia. .loom files are accessible from any
 language that supports HDF5.

Remark: This package is maintained by Steffen Moeller at
   https://salsa.debian.org/med-team/python-loompy

--- End Message ---
--- Begin Message --- 
Source: python-loompy
Source-Version: 3.0.6+dfsg-1
Done: Andreas Tille <tille@debian.org>

We believe that the bug you reported is fixed in the latest version of
python-loompy, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 934597@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated python-loompy package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Sun, 29 Mar 2020 11:39:05 +0200
Source: python-loompy
Binary: python3-loompy
Architecture: source all
Version: 3.0.6+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 python3-loompy - access loom formatted files for bioinformatics
Closes: 934597
Changes:
 python-loompy (3.0.6+dfsg-1) unstable; urgency=medium
 .
   * Team upload.
   * Initial release (Closes: #934597)
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 a3d91c9c6a74b4812769de663f773ab6 37180 python optional python3-loompy_3.0.6+dfsg-1_all.deb

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--- End Message ---
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