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Bug#952414: buster-pu: package ncbi-blast+/2.8.1-1+deb10u1



Package: release.debian.org
Severity: normal
Tags: buster
User: release.debian.org@packages.debian.org
Usertags: pu

Per #951280, x86 builds of ncbi-blast+ accidentally wound up requiring
SSE 4.2, breaking execution on older processors.  I've prepared an
update (patch attached, or at [SALSA]) adding a configure flag that
eliminates this inappropriate requirement.  (The flag is a no-op on
other architectures, and as such safe to supply unconditionally.)

May I please proceed with an upload targeting buster?

Thanks!

[SALSA] https://salsa.debian.org/med-team/ncbi-blastplus/commit/9285809bf75c98ac69ecf20add0d7415faa2d697
diff --git a/debian/changelog b/debian/changelog
index 36c35188..141d1772 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+ncbi-blast+ (2.8.1-1+deb10u1) buster; urgency=medium
+
+  * debian/rules: DEB_CONFIGURE_EXTRA_FLAGS += --without-sse42.
+    (Closes: #951280.)
+
+ -- Aaron M. Ucko <ucko@debian.org>  Sun, 23 Feb 2020 20:11:40 -0500
+
 ncbi-blast+ (2.8.1-1) unstable; urgency=medium
 
   * New upstream release.
diff --git a/debian/rules b/debian/rules
index b017193c..15568fa7 100755
--- a/debian/rules
+++ b/debian/rules
@@ -14,7 +14,7 @@ DEB_CONFIGURE_EXTRA_FLAGS=--with-dll --with-mt --without-autodep \
     --without-makefile-auto-update --with-flat-makefile --without-caution \
     --without-dbapi --without-lzo --with-runpath=/usr/lib/ncbi-blast+ \
     --with-build-root=BUILD --without-debug --without-downloaded-vdb \
-    --with-mbedtls
+    --with-mbedtls --without-sse42
 proj=algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/
 
 #ifneq (,$(findstring nostrip,$(DEB_BUILD_OPTIONS)))

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