Hi Olivier,
seems you are the most competent of the uploaders of this package. I hope
you have some spare cycles to have a look. Meanwhile I used
routine-update -f
to upsate the packaging.
Kind regards
Andreas.
----- Weitergeleitete Nachricht von Andreas Beckmann <anbe@debian.org> -----
Date: Tue, 27 Jun 2023 10:17:57 +0200
From: Andreas Beckmann <anbe@debian.org>
To: Debian Bug Tracking System <submit@bugs.debian.org>
Subject: Bug#1039562: libchado-perl: fails to access database during installation
X-Debian-PR-Message: report 1039562
X-Debian-PR-Package: libchado-perl
X-Debian-PR-Keywords:
X-Debian-PR-Source: libchado-perl
Package: libchado-perl
Version: 1.31-6
Severity: important
User: debian-qa@lists.debian.org
Usertags: piuparts
Hi,
during a test with piuparts I noticed your package fails to access its
database during intallation. A postgresql server is installed and
running before installing libchado-perl.
>From the attached log (scroll to the bottom...):
Setting up libchado-perl (1.31-6) ...
DBI connect('dbname=gmod-chado;host=localhost;port=5432','chado',...) failed: connection to server at "localhost" (127.0.0.1), port 5432 failed: FATAL: password authentication failed for user "chado"
connection to server at "localhost" (127.0.0.1), port 5432 failed: FATAL: password authentication failed for user "chado" at /usr/share/perl5/Bio/GMOD/DB/Config.pm line 233.
Database access not correctly configured
Check your configuration and run manually the database update:
cd /usr/share/gmod/chado/
export GMOD_ROOT=/usr/share/gmod/chado
export PGPASSFILE=/usr/share/gmod/chado/pgpass
For a new installation:
make load_schema
make prepdb
OR
make update to upgrade the schema from a previous install
Processing triggers for libc-bin (2.36-9) ...
Processing triggers for ca-certificates (20230311) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
libchado-perl does not seem to use dbconfig-common to configure its
database access.
cheers,
Andreas
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