Re: [Help] librostlab-blast fails its autopkgtest with C++ issue

[Andreas Tille <andreas@an3as.eu>]

Hi Aaron,

Am Sun, Jan 23, 2022 at 04:26:20PM -0500 schrieb Aaron M. Ucko:
> 
> Please try adjusting the test script to list parseblast.cpp ahead of the
> -l flags; now that --as-needed is in effect by default, the linker
> otherwise discards the libraries as not needed at the time of their
> appearance.

Ahhh, well that was simple and works.  Thanks a lot.

However, what I do not understand is that the build of
librg-blast-parser-perl remains on failing[1] (versioned Build-Depends on
fixed librostlab-blast0-dev was set):


In file included from /usr/include/rostlab/blast-parser-driver.h:26,
                 from Parser.xs:15:
blast-parser-parser.ypp:22:3: error: expected declaration before '}' token
In file included from Parser.xs:15:
/usr/include/rostlab/blast-parser-driver.h:37:1: error: 'token_type' in 'class rostlab::blast::parser' does not name a type
   37 | YY_DECL;
      | ^~~~~~~
/usr/include/rostlab/blast-parser-driver.h:61:12: error: '::yylex' has not been declared
   61 |     friend YY_DECL_FRIEND;
      |            ^~~~~~~~~~~~~~
/usr/include/rostlab/blast-parser-driver.h:61:12: error: 'token_type' declared as function returning a function
   61 |     friend YY_DECL_FRIEND;
      |            ^~~~~~~~~~~~~~
/usr/bin/perl -MExtUtils::XSpp::Cmd -e xspp -- --typemap=typemap.xsp Parser.xsp: In function 'void XS_RG__Blast__Parser_parse(PerlInterpreter*, CV*)':
/usr/bin/perl -MExtUtils::XSpp::Cmd -e xspp -- --typemap=typemap.xsp Parser.xsp:51:57: warning: too many arguments for format [-Wformat-extra-args]
make[1]: *** [Makefile:345: Parser.o] Error 1



Kind regards

      Andreas.

[1] https://salsa.debian.org/med-team/librg-blast-parser-perl/-/jobs/2395007

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