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Bug#962440: marked as done (ITP: mdanalysis -- analyse molecular dynamics files and trajectories)

Your message dated Wed, 09 Feb 2022 17:00:11 +0000
with message-id <E1nHqKB-0006wz-Hp@fasolo.debian.org>
and subject line Bug#962440: fixed in mdanalysis 2.0.0+dfsg1-1
has caused the Debian Bug report #962440,
regarding ITP: mdanalysis -- analyse molecular dynamics files and trajectories
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
962440: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=962440
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Drew Parsons <dparsons@debian.org>

* Package name    : mdanalysis
  Version         : 0.20.1
  Upstream Author : O. Beckstein and team
* URL             : https://www.mdanalysis.org/
* License         : GPL
  Programming Lang: Python
  Description     : analyse molecular dynamics files and trajectories


Enhances application of lammps, gromacs, and other molecular dynamics
simulation suites.

Complements or competes with pymatgen and mdtraj. We need them all
installable in order to be able to test which one is most useful for a
given project.

To be maintained under the Debichem Team.

--- End Message ---
--- Begin Message --- 
Source: mdanalysis
Source-Version: 2.0.0+dfsg1-1
Done: Drew Parsons <dparsons@debian.org>

We believe that the bug you reported is fixed in the latest version of
mdanalysis, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 962440@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Drew Parsons <dparsons@debian.org> (supplier of updated mdanalysis package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Fri, 03 Sep 2021 03:12:37 +0200
Source: mdanalysis
Binary: python3-mdanalysis python3-mdanalysis-dbgsym
Architecture: source amd64
Version: 2.0.0+dfsg1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Changed-By: Drew Parsons <dparsons@debian.org>
Description:
 python3-mdanalysis - analyse molecular dynamics files and trajectories
Closes: 962440
Changes:
 mdanalysis (2.0.0+dfsg1-1) unstable; urgency=medium
 .
   * New upstream release.
     - Build-Depends:
        python3-h5py,
        python3-numpy (>= 1.16.0~),
        python3-netcdf4 (>= 1.0~),
        python3-seaborn,
        python3-sklearn,
        python3-threadpoolctl
     - applies debian patch fix_matplotlib_PR2763.patch
   * Standards-Version: 4.6.0
   * add detailed copyright entries (GPL-2 and GPL-3) to
     debian/copyright, identified by :Copyright: tag in files.
     CODE_OF_CONDUCT.md is CCA-3.0.
   * debian/rules override_dh_clean: remove .c cython files
   * run tests with MPLBACKEND=agg to avoid Xserver (Xvfb) errors
   * Note that logo files are not used in source (+dfsg) since they are
     non-free (not free to alter and redistribute alterations)
 .
 mdanalysis (1.0.0+dfsg1-2) unstable; urgency=medium
 .
   * Build-Depends: python3-all-dev (needs Python.h), cython3
     python3-hypothesis, python3-sklearn (debian/tests also)
   * python3-mdanalysis Depends: python3-duecredit,
     Recommends: python3-sklearn
   * use testsuite for build-time tests with pytest
     (over all python versions)
 .
 mdanalysis (1.0.0+dfsg1-1) unstable; urgency=medium
 .
   * Initial release (Closes: #962440)
   * debian/rules: pybuild source dir PYBUILD_DIR=package
   * Build-Depends:
       python3-numpy (>=1.13.3),
       python3-biopython (>= 1.71),
       python3-networkx (>= 1.0),
       python3-griddataformats (>= 0.4.0),
       python3-six (>= 1.4.0),
       python3-mmtf (>= 1.0.0),
       python3-joblib,
       python3-scipy (>= 1.0.0),
       python3-matplotlib (>= 1.5.1),
       python3-mock,
       python3-gsd (>= 1.4.0)
   * Build-Depends: tox, python3-duecredit (to run build-time tests)
   * debian patches:
     - docs_use_built_module.patch stops doc build from using
       raw (unbuilt) source to build docs. Set PYTHONPATH to .pybuild dir.
     - fix_matplotlib_PR2763.patch applies upstream PR2763 to fix
       matplotlib API.
   * But docs are not built yet pending packaging of
     python3-sphinx-sitemap (see RFP#970811).
Checksums-Sha1:
 ef96bd17b54f88da0b0d6e6909ff5511524e7bfd 2617 mdanalysis_2.0.0+dfsg1-1.dsc
 1388f32c76fc1421998a4004ddd92a5f7b4087aa 44055092 mdanalysis_2.0.0+dfsg1.orig.tar.xz
 31c8a596cb9c425fa0c21bc37b3bf8c395794eb1 6644 mdanalysis_2.0.0+dfsg1-1.debian.tar.xz
 e634308aabd44be23e0e54d778b4c2b1e52e2589 10653 mdanalysis_2.0.0+dfsg1-1_amd64.buildinfo
 da24abac7835f24de04b0c9ef5ba60f9e568c0a8 3566852 python3-mdanalysis-dbgsym_2.0.0+dfsg1-1_amd64.deb
 d150673d7cd6f3e26439578c39eec5c42ccd3586 1125200 python3-mdanalysis_2.0.0+dfsg1-1_amd64.deb
Checksums-Sha256:
 1bfa532f7c799ce27dd9df4fd6b1f384fcc07cf63fc8dffc585476d42f95144a 2617 mdanalysis_2.0.0+dfsg1-1.dsc
 8fccca1fb6bde21ad1450c3a19da4a410ffedfde4ff227d9c1a4275ad430904a 44055092 mdanalysis_2.0.0+dfsg1.orig.tar.xz
 bf852a4d59d5d6af975b75e298519a10b7dbf390902d6907edfaabee4011f85f 6644 mdanalysis_2.0.0+dfsg1-1.debian.tar.xz
 131230d6ac777beada09e61d4c9bd42f90c2cf9a05daa5f5b0d3016f26284317 10653 mdanalysis_2.0.0+dfsg1-1_amd64.buildinfo
 3f3a7dcd50cd67c94b282cf72b01ac0e5bb1be974064e24aee0fafeeaab8b25c 3566852 python3-mdanalysis-dbgsym_2.0.0+dfsg1-1_amd64.deb
 c55a1a6653514ad615441bb76b62b14c5cb68c9c89a18a73c806de21946a3121 1125200 python3-mdanalysis_2.0.0+dfsg1-1_amd64.deb
Files:
 7253b370a8dcdf6327c22ae8114f4277 2617 python optional mdanalysis_2.0.0+dfsg1-1.dsc
 4b330c6d8380ec01e883dfb9bf2761f7 44055092 python optional mdanalysis_2.0.0+dfsg1.orig.tar.xz
 59f7de0b5eb0c9443add7d67503480d5 6644 python optional mdanalysis_2.0.0+dfsg1-1.debian.tar.xz
 0bf3db08f8f1018f2065f29eb81c5886 10653 python optional mdanalysis_2.0.0+dfsg1-1_amd64.buildinfo
 51d97e82d204a4418111fc7a0143ee9d 3566852 debug optional python3-mdanalysis-dbgsym_2.0.0+dfsg1-1_amd64.deb
 ed60b03487f2e1c1fca483363c496c03 1125200 python optional python3-mdanalysis_2.0.0+dfsg1-1_amd64.deb

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--- End Message ---
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