Snippy autopkgtest claims that snpeff is version 0

[Andreas Tille <andreas@an3as.eu>]

Hi,

I realised that snippy autopkgtest is failing for i386 and s390x[1]

The log for i386[2] says:

Get:310 http://deb.debian.org/debian testing/main i386 libsnpeff-java all 5.1+d+dfsg-3 [2,150 kB]
...
[16:13:15] Found snpEff - /usr/bin/snpEff
...
[16:13:15] Found snippy-vcf_to_tab - /usr/bin/snippy-vcf_to_tab
[16:13:15] Found snippy-vcf_report - /usr/bin/snippy-vcf_report
[16:13:15] Checking version: samtools --version is >= 1.7 - ok, have 1.16
[16:13:15] Checking version: bcftools --version is >= 1.7 - ok, have 1.16
[16:13:15] Checking version: freebayes --version is >= 1.1 - ok, have 1.3.6
[16:13:15] Need snpEff -version >= 4.3 but you have 0 - please upgrade it.
autopkgtest [16:13:16]: test run-unit-test: -----------------------]

I have no idea what this might mean.

Meanwhile I've pushed a change to ignore s390x architecture for debci since
the required bcftools does not exist here.

Kind regards
   Andreas.

[1] https://qa.debian.org/excuses.php?package=snippy
[2] https://ci.debian.net/data/autopkgtest/testing/i386/s/snippy/30738457/log.gz


-- 
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