Re: Request for sponsorship: libbio-db-ncbihelper-perl
On Mon, Dec 09, 2019 at 05:19:27PM +0100, Michael Crusoe wrote:
> This erroneous build-dep has been removed; thanks!
>
> On Sat, Dec 7, 2019 at 7:44 AM Andreas Tille <andreas@fam-tille.de> wrote:
>
> > On Fri, Dec 06, 2019 at 03:19:36PM +0100, Michael Crusoe wrote:
> > > gbp pull git@salsa.debian.org:med-team/libbio-db-ncbihelper-perl
Build time test fails anyway:
dh_auto_test
make -j4 test TEST_VERBOSE=1
make[1]: Entering directory '/build/libbio-db-ncbihelper-perl-1.7.4'
PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t
t/00-compile.t .........
1..9
ok 1 - Bio/DB/EntrezGene.pm loaded ok
ok 2 - Bio/DB/GenBank.pm loaded ok
ok 3 - Bio/DB/GenPept.pm loaded ok
ok 4 - Bio/DB/NCBIHelper.pm loaded ok
ok 5 - Bio/DB/Query/GenBank.pm loaded ok
ok 6 - Bio/DB/Taxonomy/entrez.pm loaded ok
ok 7 - bin/bp_biofetch_genbank_proxy compiled ok
ok 8 - bin/bp_download_query_genbank compiled ok
ok 9 - bin/bp_query_entrez_taxa compiled ok
ok
t/author-mojibake.t .... skipped: these tests are for testing by the author
t/author-pod-syntax.t .. skipped: these tests are for testing by the author
# No tests run!
t/EntrezGene.t .........
1..9
1..0 # Skipped: no host: www.google.com
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 9/9 subtests
# No tests run!
t/GenBank.t ............
1..44
1..0 # Skipped: no host: www.google.com
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 44/44 subtests
# No tests run!
t/GenPept.t ............
1..21
1..0 # Skipped: no host: www.google.com
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 21/21 subtests
# No tests run!
t/Query-Genbank.t ......
1..18
1..0 # Skipped: no host: www.google.com
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 18/18 subtests
# No tests run!
t/RefSeq.t .............
1..5
1..0 # Skipped: no host: www.google.com
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 5/5 subtests
t/Taxonomy.t ........... skipped: no host: www.google.com
Test Summary Report
-------------------
t/EntrezGene.t (Wstat: 65280 Tests: 0 Failed: 0)
Non-zero exit status: 255
Parse errors: More than one plan found in TAP output
Bad plan. You planned 9 tests but ran 0.
t/GenBank.t (Wstat: 65280 Tests: 0 Failed: 0)
Non-zero exit status: 255
Parse errors: More than one plan found in TAP output
Bad plan. You planned 44 tests but ran 0.
t/GenPept.t (Wstat: 65280 Tests: 0 Failed: 0)
Non-zero exit status: 255
Parse errors: More than one plan found in TAP output
Bad plan. You planned 21 tests but ran 0.
t/Query-Genbank.t (Wstat: 65280 Tests: 0 Failed: 0)
Non-zero exit status: 255
Parse errors: More than one plan found in TAP output
Bad plan. You planned 18 tests but ran 0.
t/RefSeq.t (Wstat: 65280 Tests: 0 Failed: 0)
Non-zero exit status: 255
Parse errors: More than one plan found in TAP output
Bad plan. You planned 5 tests but ran 0.
Files=9, Tests=9, 1 wallclock secs ( 0.03 usr 0.00 sys + 1.04 cusr 0.12 csys = 1.19 CPU)
Result: FAIL
Failed 5/9 test programs. 0/9 subtests failed.
Kind regards, Andreas.
--
http://fam-tille.de
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