On Thu, Sep 27, 2018 at 01:37:37PM +0200, Liubov Chuprikova wrote:
>
> Instead of this, it is possible to put into the run-unit-test script the
> same commands that are recommended in "Quick Usage" paragraph of README.md
> [1]. For this, I moved sample_data provided by upstream into a separate
> package unicycler-data [2].
>
> [1] https://github.com/rrwick/Unicycler#quick-usage
> [2]
> https://salsa.debian.org/med-team/unicycler/commit/a3b90a3a5c00e9b83a48c7746b4aa598202c8642
Makes perfectly sense to do real usage cases. (This is actually way better
than running build time tests.)
> While trying to run an autopkgtest with the commands in "Quick Usage" I got
> the following error:
> Assembling reads with miniasm... empty result
> Error: miniasm assembly failed
I also wrote to upstream about the error above [2]. Although, I have a suspicion that the reads provided just do not assemble with enough coverage and thus the command fails. But let's see what will be their answer..
Best regards,
Liubov